Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC25Q86WR0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 KRT18P68-201ENST00000392293 1000 ntBASIC20.06■□□□□ 0.8
CCDC25Q86WR0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 RARRES2P4-201ENST00000514074 484 ntBASIC20.06■□□□□ 0.8
CCDC25Q86WR0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC25Q86WR0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 NTF6G-201ENST00000591094 616 ntBASIC20.05■□□□□ 0.8
CCDC25Q86WR0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 BCL2-203ENST00000589955 5011 ntBASIC20.05■□□□□ 0.8
CCDC25Q86WR0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC25Q86WR0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 AL138781.2-201ENST00000617896 1843 ntBASIC20.04■□□□□ 0.8
CCDC25Q86WR0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.04■□□□□ 0.8
CCDC25Q86WR0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 AC100791.3-201ENST00000617619 330 ntBASIC20.04■□□□□ 0.8
CCDC25Q86WR0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 AL049812.1-201ENST00000432563 2267 ntBASIC20.04■□□□□ 0.8
CCDC25Q86WR0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC25Q86WR0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CCDC25Q86WR0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms