Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF546Q86UE3 AC067852.2-201ENST00000590513 2313 ntBASIC16.16■□□□□ 0.18
ZNF546Q86UE3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 AL031598.1-201ENST00000561511 1773 ntBASIC16.15■□□□□ 0.18
ZNF546Q86UE3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 IGHV3-19-201ENST00000521488 291 ntBASIC16.15■□□□□ 0.18
ZNF546Q86UE3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 RARRES2P11-201ENST00000635158 484 ntBASIC16.15■□□□□ 0.18
ZNF546Q86UE3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF546Q86UE3 AC005224.4-201ENST00000583262 1652 ntBASIC16.14■□□□□ 0.18
ZNF546Q86UE3 MKRN4P-201ENST00000444706 1521 ntBASIC16.14■□□□□ 0.18
ZNF546Q86UE3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 Z98044.1-201ENST00000632503 1764 ntBASIC16.14■□□□□ 0.17
ZNF546Q86UE3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 AC126544.1-201ENST00000580842 1059 ntBASIC16.14■□□□□ 0.17
ZNF546Q86UE3 AC053503.5-201ENST00000601508 636 ntBASIC16.14■□□□□ 0.17
ZNF546Q86UE3 AC233992.3-201ENST00000607491 485 ntBASIC16.14■□□□□ 0.17
ZNF546Q86UE3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms