Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LYSMD3Q7Z3D4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD3Q7Z3D4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 KRT8P8-201ENST00000434750 1448 ntBASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD3Q7Z3D4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 C1QL1P1-201ENST00000568105 661 ntBASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms