Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 AC239809.2-201ENST00000415381 517 ntBASIC12.84□□□□□ -0.35
SCXQ7RTU7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.84□□□□□ -0.35
SCXQ7RTU7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SCXQ7RTU7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SCXQ7RTU7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SCXQ7RTU7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SCXQ7RTU7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SCXQ7RTU7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.83□□□□□ -0.35
SCXQ7RTU7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.83□□□□□ -0.35
SCXQ7RTU7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SCXQ7RTU7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.83□□□□□ -0.35
SCXQ7RTU7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AC120498.8-201ENST00000614275 531 ntBASIC12.83□□□□□ -0.36
SCXQ7RTU7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AL023875.1-201ENST00000640777 796 ntBASIC12.83□□□□□ -0.36
SCXQ7RTU7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 AC011484.1-201ENST00000377652 1995 ntBASIC12.83□□□□□ -0.36
SCXQ7RTU7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SCXQ7RTU7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SCXQ7RTU7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 SNORA78-201ENST00000459373 127 ntBASIC12.82□□□□□ -0.36
SCXQ7RTU7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms