Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1AQ71U36 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1AQ71U36 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1AQ71U36 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1AQ71U36 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1AQ71U36 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 CYP21A1P-202ENST00000354927 1481 ntBASIC17.91■□□□□ 0.46
TUBA1AQ71U36 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 MIPEPP3-201ENST00000412105 444 ntBASIC17.91■□□□□ 0.46
TUBA1AQ71U36 AL512625.2-201ENST00000417533 625 ntBASIC17.91■□□□□ 0.46
TUBA1AQ71U36 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 KRT17P1-201ENST00000399211 1546 ntBASIC17.91■□□□□ 0.46
TUBA1AQ71U36 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 LTB4R2-202ENST00000528054 3092 ntBASIC17.91■□□□□ 0.46
TUBA1AQ71U36 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1AQ71U36 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1AQ71U36 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBA1AQ71U36 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBA1AQ71U36 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBA1AQ71U36 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.89■□□□□ 0.46
TUBA1AQ71U36 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 MCRIP2P1-201ENST00000394346 511 ntBASIC17.89■□□□□ 0.45
TUBA1AQ71U36 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 CYP2T3P-201ENST00000601990 817 ntBASIC17.89■□□□□ 0.45
TUBA1AQ71U36 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TUBA1AQ71U36 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 NOC2LP1-202ENST00000452600 2235 ntBASIC17.88■□□□□ 0.45
TUBA1AQ71U36 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBA1AQ71U36 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms