Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 AC231657.2-201ENST00000624556 255 ntBASIC16.91■□□□□ 0.3
C11orf88Q6PI97 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C11orf88Q6PI97 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 AC005332.8-201ENST00000622750 2735 ntBASIC16.9■□□□□ 0.3
C11orf88Q6PI97 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.9■□□□□ 0.3
C11orf88Q6PI97 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf88Q6PI97 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 PKD1P5-201ENST00000532415 10291 ntBASIC16.89■□□□□ 0.3
C11orf88Q6PI97 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
C11orf88Q6PI97 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 KRT18P20-201ENST00000548986 1279 ntBASIC16.89■□□□□ 0.29
C11orf88Q6PI97 AC104187.1-201ENST00000607510 612 ntBASIC16.89■□□□□ 0.29
C11orf88Q6PI97 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 LTB4R2-202ENST00000528054 3092 ntBASIC16.89■□□□□ 0.29
C11orf88Q6PI97 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf88Q6PI97 TMEM179-206ENST00000616017 1645 ntBASIC16.88■□□□□ 0.29
C11orf88Q6PI97 Z82202.1-201ENST00000623446 1880 ntBASIC16.88■□□□□ 0.29
C11orf88Q6PI97 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms