Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 BX119927.1-201ENST00000636596 1552 ntBASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13DQ5THJ4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 AL160286.2-201ENST00000567150 934 ntBASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 PHGDH-210ENST00000641115 1638 ntBASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13DQ5THJ4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 AP002383.4-201ENST00000442518 975 ntBASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 AC104692.2-201ENST00000603054 253 ntBASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 KRT8P8-201ENST00000434750 1448 ntBASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
VPS13DQ5THJ4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms