Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC18Q5T9S5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 AL137060.1-201ENST00000618151 2648 ntBASIC30.14■■■□□ 2.42
CCDC18Q5T9S5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC30.14■■■□□ 2.41
CCDC18Q5T9S5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.14■■■□□ 2.41
CCDC18Q5T9S5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 AL358472.4-201ENST00000633140 710 ntBASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC30.13■■■□□ 2.41
CCDC18Q5T9S5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 TSPY5P-201ENST00000426936 936 ntBASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CCDC18Q5T9S5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 AC092647.4-201ENST00000457211 535 ntBASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC30.11■■■□□ 2.41
CCDC18Q5T9S5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 AC091076.1-201ENST00000610741 619 ntBASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC18Q5T9S5 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AL441883.1-201ENST00000566170 1045 ntBASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms