Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 AC079598.2-202ENST00000546624 1451 ntBASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 RARRES2P4-201ENST00000514074 484 ntBASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 TEX21P-204ENST00000641479 1693 ntBASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 AC023632.3-201ENST00000521633 145 ntBASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
LINC00242Q5T6M2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00242Q5T6M2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms