Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 AFG3L1P-217ENST00000557444 2447 ntBASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAP1Q5SW96 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAP1Q5SW96 KRT8P8-201ENST00000434750 1448 ntBASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 RARRES2P10-201ENST00000564312 460 ntBASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.34■□□□□ 0.69
LDLRAP1Q5SW96 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAP1Q5SW96 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms