Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ALFQ53S48 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 TREX1-205ENST00000625293 1783 ntBASIC20.04■□□□□ 0.8
ALFQ53S48 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 NIFKP9-201ENST00000419265 221 ntBASIC20.04■□□□□ 0.8
ALFQ53S48 AL353807.1-201ENST00000427475 662 ntBASIC20.04■□□□□ 0.8
ALFQ53S48 AP002982.1-201ENST00000492365 877 ntBASIC20.04■□□□□ 0.8
ALFQ53S48 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ALFQ53S48 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALFQ53S48 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ALFQ53S48 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.03■□□□□ 0.8
ALFQ53S48 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ALFQ53S48 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ALFQ53S48 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.03■□□□□ 0.8
ALFQ53S48 HLA-A-209ENST00000638375 975 ntBASIC20.03■□□□□ 0.8
ALFQ53S48 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ALFQ53S48 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
ALFQ53S48 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALFQ53S48 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.03■□□□□ 0.8
ALFQ53S48 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ALFQ53S48 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.02■□□□□ 0.8
ALFQ53S48 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ALFQ53S48 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
ALFQ53S48 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ALFQ53S48 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.02■□□□□ 0.8
ALFQ53S48 AL158211.5-201ENST00000623583 2518 ntBASIC20.02■□□□□ 0.8
ALFQ53S48 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.02■□□□□ 0.8
ALFQ53S48 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ALFQ53S48 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ALFQ53S48 FAM197Y1-201ENST00000421178 764 ntBASIC20.02■□□□□ 0.8
ALFQ53S48 TSPY7P-201ENST00000431358 1114 ntBASIC20.02■□□□□ 0.8
ALFQ53S48 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 SNORA78-201ENST00000459373 127 ntBASIC20.02■□□□□ 0.8
ALFQ53S48 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.02■□□□□ 0.8
ALFQ53S48 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.02■□□□□ 0.8
ALFQ53S48 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.02■□□□□ 0.8
ALFQ53S48 AC073195.1-201ENST00000607241 877 ntBASIC20.02■□□□□ 0.8
ALFQ53S48 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ALFQ53S48 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALFQ53S48 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALFQ53S48 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
ALFQ53S48 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ALFQ53S48 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.02■□□□□ 0.79
ALFQ53S48 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALFQ53S48 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
ALFQ53S48 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.02■□□□□ 0.79
ALFQ53S48 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.01■□□□□ 0.79
ALFQ53S48 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ALFQ53S48 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ALFQ53S48 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.01■□□□□ 0.79
ALFQ53S48 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.01■□□□□ 0.79
ALFQ53S48 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.01■□□□□ 0.79
ALFQ53S48 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.01■□□□□ 0.79
ALFQ53S48 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ALFQ53S48 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.01■□□□□ 0.79
ALFQ53S48 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALFQ53S48 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ALFQ53S48 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20■□□□□ 0.79
ALFQ53S48 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
ALFQ53S48 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms