Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 PCDHAC2-203ENST00000615316 3011 ntBASIC23.59■■□□□ 1.37
RFX7Q2KHR2 MMP23A-201ENST00000234610 1017 ntBASIC23.59■■□□□ 1.37
RFX7Q2KHR2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 MESTP1-201ENST00000404287 994 ntBASIC23.59■■□□□ 1.37
RFX7Q2KHR2 TUBB8P6-201ENST00000436895 1288 ntBASIC23.59■■□□□ 1.37
RFX7Q2KHR2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX7Q2KHR2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 MIR1224-201ENST00000408193 85 ntBASIC23.58■■□□□ 1.37
RFX7Q2KHR2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 AC145285.6-201ENST00000604632 637 ntBASIC23.58■■□□□ 1.37
RFX7Q2KHR2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 AL158211.5-201ENST00000623583 2518 ntBASIC23.58■■□□□ 1.37
RFX7Q2KHR2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX7Q2KHR2 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.58■■□□□ 1.36
RFX7Q2KHR2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.36
RFX7Q2KHR2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RFX7Q2KHR2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 AC026271.3-201ENST00000571884 352 ntBASIC23.57■■□□□ 1.36
RFX7Q2KHR2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX7Q2KHR2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 MIR6786-201ENST00000616843 113 ntBASIC23.56■■□□□ 1.36
RFX7Q2KHR2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX7Q2KHR2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 AL445675.2-201ENST00000620291 557 ntBASIC23.55■■□□□ 1.36
RFX7Q2KHR2 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.55■■□□□ 1.36
RFX7Q2KHR2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms