Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH17Q12864 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH17Q12864 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CDH17Q12864 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDH17Q12864 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 POM121L13P-201ENST00000422362 380 ntBASIC19.66■□□□□ 0.74
CDH17Q12864 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH17Q12864 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.66■□□□□ 0.74
CDH17Q12864 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH17Q12864 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH17Q12864 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CDH17Q12864 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH17Q12864 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH17Q12864 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH17Q12864 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH17Q12864 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH17Q12864 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDH17Q12864 AC087289.5-201ENST00000586076 3175 ntBASIC19.65■□□□□ 0.74
CDH17Q12864 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH17Q12864 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH17Q12864 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH17Q12864 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH17Q12864 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH17Q12864 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDH17Q12864 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
CDH17Q12864 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH17Q12864 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH17Q12864 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CDH17Q12864 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 KRT18P16-201ENST00000510337 1294 ntBASIC19.64■□□□□ 0.73
CDH17Q12864 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH17Q12864 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH17Q12864 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH17Q12864 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH17Q12864 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDH17Q12864 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH17Q12864 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH17Q12864 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH17Q12864 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH17Q12864 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDH17Q12864 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH17Q12864 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH17Q12864 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 TUBB8P6-201ENST00000436895 1288 ntBASIC19.63■□□□□ 0.73
CDH17Q12864 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH17Q12864 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH17Q12864 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH17Q12864 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH17Q12864 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CDH17Q12864 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH17Q12864 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.63■□□□□ 0.73
CDH17Q12864 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH17Q12864 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDH17Q12864 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH17Q12864 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH17Q12864 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH17Q12864 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH17Q12864 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH17Q12864 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH17Q12864 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDH17Q12864 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH17Q12864 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms