Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 AP000974.1-201ENST00000623909 2387 ntBASIC15.67■□□□□ 0.1
CX3CL1P78423 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CX3CL1P78423 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.66■□□□□ 0.1
CX3CL1P78423 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.66■□□□□ 0.1
CX3CL1P78423 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CX3CL1P78423 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 AP003097.1-201ENST00000530657 1135 ntBASIC15.66■□□□□ 0.1
CX3CL1P78423 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.66■□□□□ 0.1
CX3CL1P78423 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.66■□□□□ 0.1
CX3CL1P78423 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.66■□□□□ 0.1
CX3CL1P78423 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.66■□□□□ 0.1
CX3CL1P78423 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CL1P78423 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CX3CL1P78423 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CX3CL1P78423 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
CX3CL1P78423 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 CD99P1-205ENST00000527459 561 ntBASIC15.65■□□□□ 0.1
CX3CL1P78423 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.65■□□□□ 0.1
CX3CL1P78423 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
CX3CL1P78423 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CX3CL1P78423 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CL1P78423 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.64■□□□□ 0.09
CX3CL1P78423 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CL1P78423 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 TFP1-202ENST00000475455 1573 ntBASIC15.64■□□□□ 0.09
CX3CL1P78423 AC026366.1-201ENST00000488803 879 ntBASIC15.64■□□□□ 0.09
CX3CL1P78423 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.64■□□□□ 0.09
CX3CL1P78423 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AC008403.3-201ENST00000598924 454 ntBASIC15.64■□□□□ 0.09
CX3CL1P78423 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.64■□□□□ 0.09
CX3CL1P78423 AL121906.2-201ENST00000621597 723 ntBASIC15.64■□□□□ 0.09
CX3CL1P78423 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CL1P78423 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms