Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.63■□□□□ 0.73
AP1S1P61966 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
AP1S1P61966 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.63■□□□□ 0.73
AP1S1P61966 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.63■□□□□ 0.73
AP1S1P61966 AC113410.3-201ENST00000623366 203 ntBASIC19.63■□□□□ 0.73
AP1S1P61966 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.63■□□□□ 0.73
AP1S1P61966 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.63■□□□□ 0.73
AP1S1P61966 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 KRT16P1-201ENST00000399124 1418 ntBASIC19.62■□□□□ 0.73
AP1S1P61966 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
AP1S1P61966 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.62■□□□□ 0.73
AP1S1P61966 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.62■□□□□ 0.73
AP1S1P61966 CD177P1-201ENST00000606252 935 ntBASIC19.62■□□□□ 0.73
AP1S1P61966 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
AP1S1P61966 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.62■□□□□ 0.73
AP1S1P61966 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP1S1P61966 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
AP1S1P61966 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
AP1S1P61966 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.62■□□□□ 0.73
AP1S1P61966 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP1S1P61966 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.61■□□□□ 0.73
AP1S1P61966 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP1S1P61966 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP1S1P61966 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
AP1S1P61966 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.61■□□□□ 0.73
AP1S1P61966 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.61■□□□□ 0.73
AP1S1P61966 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
AP1S1P61966 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.61■□□□□ 0.73
AP1S1P61966 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.61■□□□□ 0.73
AP1S1P61966 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.61■□□□□ 0.73
AP1S1P61966 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP1S1P61966 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
AP1S1P61966 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
AP1S1P61966 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.6■□□□□ 0.73
AP1S1P61966 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AP1S1P61966 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 FAM197Y1-201ENST00000421178 764 ntBASIC19.6■□□□□ 0.73
AP1S1P61966 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 AC026271.3-201ENST00000571884 352 ntBASIC19.6■□□□□ 0.73
AP1S1P61966 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.6■□□□□ 0.73
AP1S1P61966 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.6■□□□□ 0.73
AP1S1P61966 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
AP1S1P61966 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
AP1S1P61966 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
AP1S1P61966 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
AP1S1P61966 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.6■□□□□ 0.73
AP1S1P61966 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.6■□□□□ 0.73
AP1S1P61966 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP1S1P61966 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AP1S1P61966 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.59■□□□□ 0.73
AP1S1P61966 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
AP1S1P61966 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.59■□□□□ 0.73
AP1S1P61966 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms