Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 HTR7P1-201ENST00000538670 1336 ntBASIC17.13■□□□□ 0.33
UBE2NP61088 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2NP61088 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
UBE2NP61088 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2NP61088 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
UBE2NP61088 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
UBE2NP61088 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBE2NP61088 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2NP61088 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 AP002982.1-201ENST00000492365 877 ntBASIC17.12■□□□□ 0.33
UBE2NP61088 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2NP61088 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 KRT18P16-201ENST00000510337 1294 ntBASIC17.12■□□□□ 0.33
UBE2NP61088 AC093827.2-201ENST00000512654 315 ntBASIC17.12■□□□□ 0.33
UBE2NP61088 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2NP61088 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2NP61088 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2NP61088 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2NP61088 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
UBE2NP61088 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2NP61088 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2NP61088 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.11■□□□□ 0.33
UBE2NP61088 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 RPS2P4-201ENST00000476944 856 ntBASIC17.11■□□□□ 0.33
UBE2NP61088 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.11■□□□□ 0.33
UBE2NP61088 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2NP61088 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2NP61088 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2NP61088 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2NP61088 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBE2NP61088 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBE2NP61088 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2NP61088 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.1■□□□□ 0.33
UBE2NP61088 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBE2NP61088 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBE2NP61088 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 PCDHAC2-203ENST00000615316 3011 ntBASIC17.1■□□□□ 0.33
UBE2NP61088 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2NP61088 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.09■□□□□ 0.33
UBE2NP61088 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBE2NP61088 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms