Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
GSCP56915 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GSCP56915 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
GSCP56915 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.58■□□□□ 0.89
GSCP56915 AC026366.1-201ENST00000488803 879 ntBASIC20.58■□□□□ 0.89
GSCP56915 RNA5SP413-201ENST00000516373 109 ntBASIC20.58■□□□□ 0.89
GSCP56915 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.58■□□□□ 0.89
GSCP56915 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GSCP56915 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.58■□□□□ 0.88
GSCP56915 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.58■□□□□ 0.88
GSCP56915 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.58■□□□□ 0.88
GSCP56915 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GSCP56915 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.57■□□□□ 0.88
GSCP56915 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
GSCP56915 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
GSCP56915 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.57■□□□□ 0.88
GSCP56915 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 KRT18P16-201ENST00000510337 1294 ntBASIC20.57■□□□□ 0.88
GSCP56915 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.57■□□□□ 0.88
GSCP56915 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
GSCP56915 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 AC093484.2-201ENST00000580996 2166 ntBASIC20.57■□□□□ 0.88
GSCP56915 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.57■□□□□ 0.88
GSCP56915 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GSCP56915 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GSCP56915 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GSCP56915 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.56■□□□□ 0.88
GSCP56915 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GSCP56915 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
GSCP56915 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.56■□□□□ 0.88
GSCP56915 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.56■□□□□ 0.88
GSCP56915 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
GSCP56915 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.56■□□□□ 0.88
GSCP56915 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GSCP56915 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 Z82202.1-201ENST00000623446 1880 ntBASIC20.56■□□□□ 0.88
GSCP56915 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GSCP56915 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GSCP56915 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GSCP56915 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GSCP56915 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GSCP56915 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.55■□□□□ 0.88
GSCP56915 AC116562.4-201ENST00000641316 2276 ntBASIC20.55■□□□□ 0.88
GSCP56915 AC005332.7-201ENST00000614046 2005 ntBASIC20.54■□□□□ 0.88
GSCP56915 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GSCP56915 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GSCP56915 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GSCP56915 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms