Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 TUBB8P6-201ENST00000436895 1288 ntBASIC17.38■□□□□ 0.37
CLDN17P56750 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN17P56750 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN17P56750 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN17P56750 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CLDN17P56750 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN17P56750 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN17P56750 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN17P56750 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN17P56750 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN17P56750 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN17P56750 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLDN17P56750 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLDN17P56750 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN17P56750 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 KRT18P16-201ENST00000510337 1294 ntBASIC17.37■□□□□ 0.37
CLDN17P56750 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN17P56750 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN17P56750 ITM2C-210ENST00000620962 501 ntBASIC17.37■□□□□ 0.37
CLDN17P56750 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLDN17P56750 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN17P56750 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN17P56750 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CLDN17P56750 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 AC138932.1-201ENST00000534164 6830 ntBASIC17.36■□□□□ 0.37
CLDN17P56750 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN17P56750 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN17P56750 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN17P56750 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 C1QBPP2-201ENST00000528754 825 ntBASIC17.36■□□□□ 0.37
CLDN17P56750 AC004264.1-201ENST00000608354 794 ntBASIC17.36■□□□□ 0.37
CLDN17P56750 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN17P56750 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN17P56750 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN17P56750 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN17P56750 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLDN17P56750 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN17P56750 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN17P56750 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN17P56750 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN17P56750 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN17P56750 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN17P56750 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 AC124016.1-201ENST00000609552 612 ntBASIC17.35■□□□□ 0.37
CLDN17P56750 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 KRT8P8-201ENST00000434750 1448 ntBASIC17.35■□□□□ 0.37
CLDN17P56750 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN17P56750 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN17P56750 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms