Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CCL18P55774 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CCL18P55774 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL18P55774 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL18P55774 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 PTBP1P-201ENST00000554374 1601 ntBASIC13.72□□□□□ -0.21
CCL18P55774 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL18P55774 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL18P55774 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL18P55774 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL18P55774 NBPF21P-201ENST00000425093 1451 ntBASIC13.72□□□□□ -0.21
CCL18P55774 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL18P55774 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL18P55774 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL18P55774 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL18P55774 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL18P55774 AC112907.3-201ENST00000577781 2400 ntBASIC13.71□□□□□ -0.21
CCL18P55774 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CCL18P55774 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL18P55774 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCL18P55774 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL18P55774 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL18P55774 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL18P55774 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL18P55774 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL18P55774 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL18P55774 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL18P55774 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL18P55774 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL18P55774 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL18P55774 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CCL18P55774 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL18P55774 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL18P55774 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms