Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH12P55289 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH12P55289 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH12P55289 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH12P55289 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH12P55289 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CDH12P55289 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH12P55289 AC023632.3-201ENST00000521633 145 ntBASIC18.12■□□□□ 0.49
CDH12P55289 AL137784.2-201ENST00000607332 1000 ntBASIC18.12■□□□□ 0.49
CDH12P55289 AL050303.2-201ENST00000619798 666 ntBASIC18.12■□□□□ 0.49
CDH12P55289 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH12P55289 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH12P55289 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 NEFHP1-201ENST00000412845 2629 ntBASIC18.12■□□□□ 0.49
CDH12P55289 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDH12P55289 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH12P55289 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH12P55289 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH12P55289 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CDH12P55289 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 MIR935-201ENST00000401179 91 ntBASIC18.11■□□□□ 0.49
CDH12P55289 AC105036.2-201ENST00000569468 176 ntBASIC18.11■□□□□ 0.49
CDH12P55289 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH12P55289 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH12P55289 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH12P55289 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH12P55289 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH12P55289 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH12P55289 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH12P55289 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH12P55289 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH12P55289 HCG11-201ENST00000411553 5696 ntBASIC18.1■□□□□ 0.49
CDH12P55289 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CDH12P55289 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH12P55289 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 MKRN4P-201ENST00000444706 1521 ntBASIC18.1■□□□□ 0.49
CDH12P55289 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 AC026185.1-201ENST00000445748 174 ntBASIC18.1■□□□□ 0.49
CDH12P55289 AF201337.1-201ENST00000520239 748 ntBASIC18.1■□□□□ 0.49
CDH12P55289 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH12P55289 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH12P55289 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH12P55289 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH12P55289 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH12P55289 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH12P55289 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDH12P55289 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH12P55289 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH12P55289 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms