Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 MIR4785-201ENST00000585005 73 ntBASIC20.62■□□□□ 0.89
CACNA2D1P54289 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.62■□□□□ 0.89
CACNA2D1P54289 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CACNA2D1P54289 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D1P54289 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 KSR1P1-201ENST00000446298 240 ntBASIC20.61■□□□□ 0.89
CACNA2D1P54289 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 AP003071.4-201ENST00000562276 1284 ntBASIC20.61■□□□□ 0.89
CACNA2D1P54289 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 HLA-A-209ENST00000638375 975 ntBASIC20.61■□□□□ 0.89
CACNA2D1P54289 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D1P54289 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CACNA2D1P54289 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA2D1P54289 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.6■□□□□ 0.89
CACNA2D1P54289 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 NUDT16P1-203ENST00000513809 620 ntBASIC20.59■□□□□ 0.89
CACNA2D1P54289 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 REXO1L10P-201ENST00000615707 1290 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms