Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC27.96■■■□□ 2.07
CLTCL1P53675 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CLTCL1P53675 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC27.96■■■□□ 2.07
CLTCL1P53675 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC27.96■■■□□ 2.07
CLTCL1P53675 AL441883.1-201ENST00000566170 1045 ntBASIC27.96■■■□□ 2.07
CLTCL1P53675 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
CLTCL1P53675 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC27.96■■■□□ 2.07
CLTCL1P53675 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
CLTCL1P53675 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.07
CLTCL1P53675 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC27.95■■■□□ 2.07
CLTCL1P53675 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC27.95■■■□□ 2.06
CLTCL1P53675 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC27.95■■■□□ 2.06
CLTCL1P53675 RNF152P1-201ENST00000397754 604 ntBASIC27.95■■■□□ 2.06
CLTCL1P53675 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC27.95■■■□□ 2.06
CLTCL1P53675 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC27.95■■■□□ 2.06
CLTCL1P53675 USF2-205ENST00000594064 1179 ntTSL 2 BASIC27.95■■■□□ 2.06
CLTCL1P53675 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC27.95■■■□□ 2.06
CLTCL1P53675 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CLTCL1P53675 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CLTCL1P53675 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CLTCL1P53675 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CLTCL1P53675 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CLTCL1P53675 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC27.94■■■□□ 2.06
CLTCL1P53675 COPE-203ENST00000351079 907 ntTSL 2 BASIC27.94■■■□□ 2.06
CLTCL1P53675 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CLTCL1P53675 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.94■■■□□ 2.06
CLTCL1P53675 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC27.94■■■□□ 2.06
CLTCL1P53675 LINC01238-205ENST00000567549 1107 ntBASIC27.94■■■□□ 2.06
CLTCL1P53675 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
CLTCL1P53675 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC27.94■■■□□ 2.06
CLTCL1P53675 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CLTCL1P53675 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CLTCL1P53675 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC27.93■■■□□ 2.06
CLTCL1P53675 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
CLTCL1P53675 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC27.93■■■□□ 2.06
CLTCL1P53675 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
CLTCL1P53675 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 AC099778.1-201ENST00000568593 1911 ntBASIC27.93■■■□□ 2.06
CLTCL1P53675 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CLTCL1P53675 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CLTCL1P53675 KRT18P38-201ENST00000449496 1282 ntBASIC27.92■■■□□ 2.06
CLTCL1P53675 PRSS44-201ENST00000515154 1146 ntBASIC27.92■■■□□ 2.06
CLTCL1P53675 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC27.92■■■□□ 2.06
CLTCL1P53675 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC27.92■■■□□ 2.06
CLTCL1P53675 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC27.92■■■□□ 2.06
CLTCL1P53675 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CLTCL1P53675 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CLTCL1P53675 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
CLTCL1P53675 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC27.92■■■□□ 2.06
CLTCL1P53675 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CLTCL1P53675 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CLTCL1P53675 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC27.92■■■□□ 2.06
CLTCL1P53675 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
CLTCL1P53675 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC27.92■■■□□ 2.06
CLTCL1P53675 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC27.92■■■□□ 2.06
CLTCL1P53675 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.92■■■□□ 2.06
CLTCL1P53675 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
CLTCL1P53675 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CLTCL1P53675 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
CLTCL1P53675 KRT8P45-201ENST00000414328 1447 ntBASIC27.91■■■□□ 2.06
CLTCL1P53675 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CLTCL1P53675 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CLTCL1P53675 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CLTCL1P53675 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC27.91■■■□□ 2.06
CLTCL1P53675 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC27.91■■■□□ 2.06
CLTCL1P53675 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
CLTCL1P53675 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC27.91■■■□□ 2.06
CLTCL1P53675 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CLTCL1P53675 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC27.91■■■□□ 2.06
CLTCL1P53675 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CLTCL1P53675 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC27.91■■■□□ 2.06
CLTCL1P53675 TCF3P1-201ENST00000423021 1937 ntBASIC27.91■■■□□ 2.06
CLTCL1P53675 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC27.9■■■□□ 2.06
CLTCL1P53675 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC27.9■■■□□ 2.06
CLTCL1P53675 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC27.9■■■□□ 2.06
CLTCL1P53675 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC27.9■■■□□ 2.06
CLTCL1P53675 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
CLTCL1P53675 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CLTCL1P53675 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC27.9■■■□□ 2.06
CLTCL1P53675 AL391422.3-201ENST00000603791 2761 ntBASIC27.9■■■□□ 2.06
CLTCL1P53675 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
CLTCL1P53675 BET1L-202ENST00000332865 533 ntTSL 5 BASIC27.89■■■□□ 2.06
CLTCL1P53675 COPS8-203ENST00000409334 794 ntTSL 5 BASIC27.89■■■□□ 2.06
CLTCL1P53675 UPK3BP1-201ENST00000428678 509 ntBASIC27.89■■■□□ 2.06
CLTCL1P53675 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CLTCL1P53675 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
CLTCL1P53675 NT5C-210ENST00000582160 860 ntTSL 2 BASIC27.89■■■□□ 2.06
CLTCL1P53675 MIR4674-201ENST00000582457 87 ntBASIC27.89■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms