Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.01□□□□□ -1.456e-54■■□□□ 14
NCBP2P52298 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.01□□□□□ -1.456e-54■■□□□ 14
NCBP2P52298 EPS8-214ENST00000544064 577 ntTSL 419.87■□□□□ 0.772e-6■■□□□ 14
NCBP2P52298 EPS8-205ENST00000536793 559 ntTSL 416.74■□□□□ 0.272e-6■■□□□ 14
NCBP2P52298 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.12e-6■■□□□ 14
NCBP2P52298 EPS8-206ENST00000536956 621 ntTSL 314.82□□□□□ -0.042e-6■■□□□ 14
NCBP2P52298 EPS8-211ENST00000543468 3722 ntTSL 1 (best)12.02□□□□□ -0.492e-6■■□□□ 14
NCBP2P52298 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.582e-6■■□□□ 14
NCBP2P52298 EPS8-204ENST00000535752 543 ntTSL 43.89□□□□□ -1.792e-6■■□□□ 14
NCBP2P52298 AMPD2-223ENST00000531734 572 ntTSL 414.79□□□□□ -0.042e-11■■□□□ 14
NCBP2P52298 AMPD2-209ENST00000474459 814 ntTSL 414.55□□□□□ -0.082e-11■■□□□ 14
NCBP2P52298 AMPD2-215ENST00000526301 2354 ntTSL 1 (best)13.25□□□□□ -0.292e-11■■□□□ 14
NCBP2P52298 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.322e-11■■□□□ 14
NCBP2P52298 AMPD2-208ENST00000469039 513 ntTSL 410.99□□□□□ -0.652e-11■■□□□ 14
NCBP2P52298 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC10.66□□□□□ -0.72e-11■■□□□ 14
NCBP2P52298 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.32e-28■■□□□ 14
NCBP2P52298 NECAB3-221ENST00000607055 554 ntTSL 420.21■□□□□ 0.832e-12■■□□□ 14
NCBP2P52298 NECAB3-210ENST00000484824 596 ntTSL 216.62■□□□□ 0.252e-12■■□□□ 14
NCBP2P52298 C20orf24-205ENST00000491113 734 ntTSL 224.06■■□□□ 1.444e-13■■□□□ 14
NCBP2P52298 PAXBP1-206ENST00000464256 1692 ntTSL 1 (best)23.53■■□□□ 1.365e-7■■□□□ 14
NCBP2P52298 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.23■■□□□ 1.154e-13■■□□□ 14
NCBP2P52298 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.154e-13■■□□□ 14
NCBP2P52298 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.12■■□□□ 1.134e-13■■□□□ 14
NCBP2P52298 FAM129B-207ENST00000484348 654 ntTSL 1 (best)21.01■□□□□ 0.955e-7■■□□□ 14
NCBP2P52298 IRF3-220ENST00000598108 1118 ntTSL 321■□□□□ 0.955e-7■■□□□ 14
NCBP2P52298 PAXBP1-208ENST00000472588 1410 ntTSL 1 (best)20.96■□□□□ 0.955e-7■■□□□ 14
NCBP2P52298 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.51■□□□□ 0.875e-7■■□□□ 14
NCBP2P52298 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.67■□□□□ 0.745e-7■■□□□ 14
NCBP2P52298 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.58■□□□□ 0.725e-7■■□□□ 14
NCBP2P52298 NAA20-207ENST00000484480 1222 ntTSL 519.58■□□□□ 0.725e-7■■□□□ 14
NCBP2P52298 C20orf24-206ENST00000492721 1044 ntTSL 219.55■□□□□ 0.724e-13■■□□□ 14
NCBP2P52298 TRIM41-208ENST00000515499 914 ntTSL 319.35■□□□□ 0.695e-7■■□□□ 14
NCBP2P52298 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.65e-7■■□□□ 14
NCBP2P52298 PAXBP1-204ENST00000443785 2920 ntTSL 1 (best)17.93■□□□□ 0.465e-7■■□□□ 14
NCBP2P52298 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.49■□□□□ 0.395e-7■■□□□ 14
NCBP2P52298 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.355e-7■■□□□ 14
NCBP2P52298 SLC27A5-205ENST00000595851 2003 ntTSL 217.1■□□□□ 0.335e-7■■□□□ 14
NCBP2P52298 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.35e-7■■□□□ 14
NCBP2P52298 IRF3-216ENST00000597180 301 ntTSL 516.75■□□□□ 0.275e-7■■□□□ 14
NCBP2P52298 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.56■□□□□ 0.245e-7■■□□□ 14
NCBP2P52298 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)16.27■□□□□ 0.24e-13■■□□□ 14
NCBP2P52298 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.175e-7■■□□□ 14
NCBP2P52298 IRF3-208ENST00000594387 800 ntTSL 315.96■□□□□ 0.155e-7■■□□□ 14
NCBP2P52298 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.085e-7■■□□□ 14
NCBP2P52298 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.035e-7■■□□□ 14
NCBP2P52298 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.034e-13■■□□□ 14
NCBP2P52298 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.235e-7■■□□□ 14
NCBP2P52298 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.61□□□□□ -0.235e-7■■□□□ 14
NCBP2P52298 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.51□□□□□ -0.255e-7■■□□□ 14
NCBP2P52298 TRIM41-204ENST00000508930 3834 ntTSL 1 (best)13.43□□□□□ -0.265e-7■■□□□ 14
NCBP2P52298 MEMO1-208ENST00000437854 315 ntTSL 513.36□□□□□ -0.275e-7■■□□□ 14
NCBP2P52298 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.13□□□□□ -0.315e-7■■□□□ 14
NCBP2P52298 MEMO1-209ENST00000490459 1242 ntTSL 212.96□□□□□ -0.335e-7■■□□□ 14
NCBP2P52298 IRF3-229ENST00000601373 680 ntTSL 212.93□□□□□ -0.345e-7■■□□□ 14
NCBP2P52298 ZNF100-205ENST00000598026 588 ntTSL 412.58□□□□□ -0.45e-7■■□□□ 14
NCBP2P52298 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.445e-7■■□□□ 14
NCBP2P52298 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC11.97□□□□□ -0.495e-7■■□□□ 14
NCBP2P52298 TYW1-205ENST00000491969 495 ntTSL 411.47□□□□□ -0.575e-7■■□□□ 14
NCBP2P52298 CCT6P1-201ENST00000434500 1544 ntBASIC11.22□□□□□ -0.615e-7■■□□□ 14
NCBP2P52298 SLC27A5-206ENST00000599700 474 ntTSL 210.82□□□□□ -0.685e-7■■□□□ 14
NCBP2P52298 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.695e-7■■□□□ 14
NCBP2P52298 TYW1-203ENST00000442959 563 ntTSL 410.61□□□□□ -0.715e-7■■□□□ 14
NCBP2P52298 BMP4-207ENST00000559501 1112 ntTSL 210.27□□□□□ -0.775e-7■■□□□ 14
NCBP2P52298 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC10.18□□□□□ -0.785e-7■■□□□ 14
NCBP2P52298 TYW1-207ENST00000615572 3156 ntTSL 5 BASIC9.72□□□□□ -0.855e-7■■□□□ 14
NCBP2P52298 SLC27A5-208ENST00000601997 575 ntTSL 29.41□□□□□ -0.95e-7■■□□□ 14
NCBP2P52298 TYW1-202ENST00000361660 3255 ntTSL 1 (best)9.07□□□□□ -0.965e-7■■□□□ 14
NCBP2P52298 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.045e-7■■□□□ 14
NCBP2P52298 TYW1-204ENST00000475392 574 ntTSL 28.54□□□□□ -1.045e-7■■□□□ 14
NCBP2P52298 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.43□□□□□ -1.065e-7■■□□□ 14
NCBP2P52298 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.25e-7■■□□□ 14
NCBP2P52298 NAA20-205ENST00000480550 1000 ntTSL 56.06□□□□□ -1.445e-7■■□□□ 14
NCBP2P52298 NAA20-204ENST00000463154 1036 ntTSL 35.85□□□□□ -1.475e-7■■□□□ 14
NCBP2P52298 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.72□□□□□ -1.655e-7■■□□□ 14
NCBP2P52298 DPY30-206ENST00000446765 1519 ntTSL 52.71□□□□□ -1.985e-7■■□□□ 14
NCBP2P52298 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.082e-6■■□□□ 14
NCBP2P52298 PACSIN2-210ENST00000453643 818 ntTSL 514.49□□□□□ -0.092e-6■■□□□ 14
NCBP2P52298 PACSIN2-208ENST00000445706 511 ntTSL 510.1□□□□□ -0.792e-6■■□□□ 14
NCBP2P52298 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-7■■□□□ 14
NCBP2P52298 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.69e-7■■□□□ 14
NCBP2P52298 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.049e-7■■□□□ 14
NCBP2P52298 ERF-206ENST00000596818 566 ntTSL 314.37□□□□□ -0.119e-7■■□□□ 14
NCBP2P52298 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.464e-16■■□□□ 14
NCBP2P52298 SRSF2-201ENST00000358156 572 ntTSL 417.22■□□□□ 0.354e-16■■□□□ 14
NCBP2P52298 SRSF2-207ENST00000583836 561 ntTSL 516.05■□□□□ 0.164e-16■■□□□ 14
NCBP2P52298 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.68■□□□□ 0.14e-16■■□□□ 14
NCBP2P52298 SRSF2-204ENST00000452355 1357 ntTSL 514.62□□□□□ -0.074e-16■■□□□ 14
NCBP2P52298 SRSF2-208ENST00000585202 1359 ntTSL 314.03□□□□□ -0.164e-16■■□□□ 14
NCBP2P52298 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.274e-16■■□□□ 14
NCBP2P52298 ZNF267-205ENST00000566541 589 ntTSL 411.59□□□□□ -0.554e-7■■□□□ 14
NCBP2P52298 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC9.54□□□□□ -0.884e-7■■□□□ 14
NCBP2P52298 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.934e-7■■□□□ 14
NCBP2P52298 ZNF267-203ENST00000561814 563 ntTSL 47.35□□□□□ -1.234e-7■■□□□ 14
NCBP2P52298 UBR1-212ENST00000627960 189 ntTSL 5 BASIC11.02□□□□□ -0.654e-7■■□□□ 14
NCBP2P52298 UBR1-210ENST00000569337 549 ntTSL 58.69□□□□□ -1.024e-7■■□□□ 14
NCBP2P52298 UBR1-204ENST00000563239 545 ntTSL 37.88□□□□□ -1.154e-7■■□□□ 14
NCBP2P52298 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.16□□□□□ -1.264e-7■■□□□ 14
NCBP2P52298 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.664e-7■■□□□ 14
NCBP2P52298 BCAR1-218ENST00000566982 3024 ntTSL 214.37□□□□□ -0.112e-6■■□□□ 14
NCBP2P52298 RDH11-211ENST00000557726 621 ntTSL 311.55□□□□□ -0.568e-7■■□□□ 13.9
Retrieved 100 of 18,329 protein–RNA pairs in 189.2 ms