Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1P51610 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC1P51610 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 KRT18P48-201ENST00000434763 852 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 AL121894.2-201ENST00000602977 491 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 AC139887.4-201ENST00000607877 719 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 AC008622.2-201ENST00000617006 1229 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 AC116562.4-202ENST00000641738 218 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 SLC25A24-204ENST00000569674 2357 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC1P51610 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC1P51610 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.99■□□□□ 0.31
HCFC1P51610 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HCFC1P51610 CA15P1-201ENST00000481698 905 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC1P51610 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 LINC01006-201ENST00000333319 2292 ntBASIC16.99■□□□□ 0.31
HCFC1P51610 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC1P51610 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HCFC1P51610 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HCFC1P51610 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HCFC1P51610 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 PCED1CP-201ENST00000419887 785 ntBASIC16.98■□□□□ 0.31
HCFC1P51610 FAM86EP-206ENST00000510506 987 ntBASIC16.98■□□□□ 0.31
HCFC1P51610 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC1P51610 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC1P51610 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC1P51610 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1P51610 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC1P51610 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC1P51610 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1P51610 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1P51610 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
HCFC1P51610 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1P51610 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1P51610 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 AC009947.2-201ENST00000444014 672 ntBASIC16.97■□□□□ 0.31
HCFC1P51610 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC1P51610 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCFC1P51610 LINC01521-201ENST00000504184 1943 ntBASIC16.97■□□□□ 0.31
HCFC1P51610 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCFC1P51610 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.97■□□□□ 0.31
HCFC1P51610 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
HCFC1P51610 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.97■□□□□ 0.31
HCFC1P51610 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.97■□□□□ 0.31
HCFC1P51610 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1P51610 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1P51610 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms