Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PRIM2P49643 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.49■□□□□ 0.55
PRIM2P49643 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.49■□□□□ 0.55
PRIM2P49643 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PRIM2P49643 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRIM2P49643 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRIM2P49643 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.48■□□□□ 0.55
PRIM2P49643 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.48■□□□□ 0.55
PRIM2P49643 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
PRIM2P49643 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.48■□□□□ 0.55
PRIM2P49643 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.48■□□□□ 0.55
PRIM2P49643 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PRIM2P49643 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRIM2P49643 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PRIM2P49643 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRIM2P49643 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRIM2P49643 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 AC073210.2-201ENST00000430369 194 ntBASIC18.47■□□□□ 0.55
PRIM2P49643 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.47■□□□□ 0.55
PRIM2P49643 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.47■□□□□ 0.55
PRIM2P49643 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.47■□□□□ 0.55
PRIM2P49643 AC005829.2-201ENST00000571422 1056 ntBASIC18.47■□□□□ 0.55
PRIM2P49643 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PRIM2P49643 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 AL109923.1-201ENST00000618799 583 ntBASIC18.47■□□□□ 0.55
PRIM2P49643 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRIM2P49643 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.47■□□□□ 0.55
PRIM2P49643 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.55
PRIM2P49643 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRIM2P49643 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRIM2P49643 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms