Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT6CP48668 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 HLA-B-256ENST00000639848 1089 ntBASIC18.85■□□□□ 0.61
KRT6CP48668 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6CP48668 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
KRT6CP48668 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
KRT6CP48668 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT6CP48668 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KRT6CP48668 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT6CP48668 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
KRT6CP48668 HCG11-201ENST00000411553 5696 ntBASIC18.84■□□□□ 0.61
KRT6CP48668 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT6CP48668 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT6CP48668 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT6CP48668 RPS2P52-201ENST00000469610 820 ntBASIC18.84■□□□□ 0.61
KRT6CP48668 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KRT6CP48668 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 AP000974.1-201ENST00000623909 2387 ntBASIC18.84■□□□□ 0.61
KRT6CP48668 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
KRT6CP48668 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT6CP48668 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.83■□□□□ 0.61
KRT6CP48668 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT6CP48668 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.83■□□□□ 0.6
KRT6CP48668 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT6CP48668 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
KRT6CP48668 MYC-209ENST00000641252 345 ntBASIC18.83■□□□□ 0.6
KRT6CP48668 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT6CP48668 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT6CP48668 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT6CP48668 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT6CP48668 AC098818.2-201ENST00000564925 2320 ntBASIC18.83■□□□□ 0.6
KRT6CP48668 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT6CP48668 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT6CP48668 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT6CP48668 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KRT6CP48668 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT6CP48668 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.82■□□□□ 0.6
KRT6CP48668 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT6CP48668 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT6CP48668 AL121906.2-201ENST00000621597 723 ntBASIC18.82■□□□□ 0.6
KRT6CP48668 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT6CP48668 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms