Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 KRT8P9-201ENST00000558927 1449 ntBASIC19.46■□□□□ 0.71
RXRGP48443 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRGP48443 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.46■□□□□ 0.71
RXRGP48443 FITM1-202ENST00000559294 800 ntBASIC19.46■□□□□ 0.71
RXRGP48443 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.46■□□□□ 0.71
RXRGP48443 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRGP48443 AC087289.5-201ENST00000586076 3175 ntBASIC19.46■□□□□ 0.71
RXRGP48443 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRGP48443 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRGP48443 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.45■□□□□ 0.7
RXRGP48443 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 MIR1238-201ENST00000408483 83 ntBASIC19.45■□□□□ 0.7
RXRGP48443 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.45■□□□□ 0.7
RXRGP48443 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
RXRGP48443 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.45■□□□□ 0.7
RXRGP48443 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RXRGP48443 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRGP48443 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRGP48443 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RXRGP48443 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRGP48443 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RXRGP48443 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRGP48443 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRGP48443 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRGP48443 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RXRGP48443 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRGP48443 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RXRGP48443 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.44■□□□□ 0.7
RXRGP48443 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRGP48443 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRGP48443 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RXRGP48443 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRGP48443 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRGP48443 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRGP48443 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRGP48443 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRGP48443 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RXRGP48443 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.43■□□□□ 0.7
RXRGP48443 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.43■□□□□ 0.7
RXRGP48443 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRGP48443 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 AL445228.2-201ENST00000605589 952 ntBASIC19.43■□□□□ 0.7
RXRGP48443 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RXRGP48443 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RXRGP48443 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 LINC01568-207ENST00000641790 1380 ntBASIC19.43■□□□□ 0.7
RXRGP48443 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRGP48443 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
RXRGP48443 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRGP48443 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRGP48443 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.42■□□□□ 0.7
RXRGP48443 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RXRGP48443 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RXRGP48443 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RXRGP48443 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRGP48443 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms