Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 AC135050.7-201ENST00000624508 2218 ntBASIC16.92■□□□□ 0.3
GDNFP39905 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
GDNFP39905 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 DUX4L16-201ENST00000555130 1264 ntBASIC16.92■□□□□ 0.3
GDNFP39905 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDNFP39905 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.92■□□□□ 0.3
GDNFP39905 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.92■□□□□ 0.3
GDNFP39905 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.92■□□□□ 0.3
GDNFP39905 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.91■□□□□ 0.3
GDNFP39905 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.91■□□□□ 0.3
GDNFP39905 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.91■□□□□ 0.3
GDNFP39905 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.91■□□□□ 0.3
GDNFP39905 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.91■□□□□ 0.3
GDNFP39905 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
GDNFP39905 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GDNFP39905 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.91■□□□□ 0.3
GDNFP39905 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GDNFP39905 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GDNFP39905 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
GDNFP39905 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.9■□□□□ 0.3
GDNFP39905 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GDNFP39905 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 CNN2P6-201ENST00000439038 900 ntBASIC16.9■□□□□ 0.3
GDNFP39905 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.9■□□□□ 0.3
GDNFP39905 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.9■□□□□ 0.3
GDNFP39905 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GDNFP39905 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.9■□□□□ 0.3
GDNFP39905 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GDNFP39905 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.9■□□□□ 0.3
GDNFP39905 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.9■□□□□ 0.3
GDNFP39905 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GDNFP39905 PCDHB18P-201ENST00000524813 2368 ntBASIC16.89■□□□□ 0.3
GDNFP39905 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GDNFP39905 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms