Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
USP6P35125 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
USP6P35125 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 KRT8P45-201ENST00000414328 1447 ntBASIC26.38■■□□□ 1.81
USP6P35125 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
USP6P35125 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.38■■□□□ 1.81
USP6P35125 FAM86EP-206ENST00000510506 987 ntBASIC26.38■■□□□ 1.81
USP6P35125 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.38■■□□□ 1.81
USP6P35125 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.38■■□□□ 1.81
USP6P35125 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP6P35125 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.37■■□□□ 1.81
USP6P35125 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
USP6P35125 KRT18P38-201ENST00000449496 1282 ntBASIC26.37■■□□□ 1.81
USP6P35125 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.37■■□□□ 1.81
USP6P35125 PRSS44-201ENST00000515154 1146 ntBASIC26.37■■□□□ 1.81
USP6P35125 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26.37■■□□□ 1.81
USP6P35125 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.37■■□□□ 1.81
USP6P35125 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.37■■□□□ 1.81
USP6P35125 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6P35125 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC26.37■■□□□ 1.81
USP6P35125 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.37■■□□□ 1.81
USP6P35125 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.37■■□□□ 1.81
USP6P35125 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.36■■□□□ 1.81
USP6P35125 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
USP6P35125 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
USP6P35125 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
USP6P35125 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC26.36■■□□□ 1.81
USP6P35125 AC009947.2-201ENST00000444014 672 ntBASIC26.36■■□□□ 1.81
USP6P35125 HOMER2P1-201ENST00000455653 964 ntBASIC26.36■■□□□ 1.81
USP6P35125 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC26.36■■□□□ 1.81
USP6P35125 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC26.36■■□□□ 1.81
USP6P35125 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.36■■□□□ 1.81
USP6P35125 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.36■■□□□ 1.81
USP6P35125 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
USP6P35125 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6P35125 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC26.36■■□□□ 1.81
USP6P35125 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.35■■□□□ 1.81
USP6P35125 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC26.35■■□□□ 1.81
USP6P35125 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6P35125 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC26.35■■□□□ 1.81
USP6P35125 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.35■■□□□ 1.81
USP6P35125 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
USP6P35125 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
USP6P35125 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.35■■□□□ 1.81
USP6P35125 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.35■■□□□ 1.81
USP6P35125 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.35■■□□□ 1.81
USP6P35125 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6P35125 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.35■■□□□ 1.81
USP6P35125 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6P35125 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.35■■□□□ 1.81
USP6P35125 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6P35125 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6P35125 AC007375.3-201ENST00000600936 2314 ntBASIC26.34■■□□□ 1.81
USP6P35125 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6P35125 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6P35125 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP6P35125 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP6P35125 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.34■■□□□ 1.81
USP6P35125 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.34■■□□□ 1.81
USP6P35125 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6P35125 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC26.34■■□□□ 1.81
USP6P35125 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
USP6P35125 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC26.34■■□□□ 1.81
USP6P35125 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
USP6P35125 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
USP6P35125 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
USP6P35125 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 AL671277.2-201ENST00000458060 996 ntBASIC26.33■■□□□ 1.81
USP6P35125 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
USP6P35125 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.33■■□□□ 1.81
USP6P35125 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.33■■□□□ 1.81
USP6P35125 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.33■■□□□ 1.81
USP6P35125 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.33■■□□□ 1.81
USP6P35125 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms