Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.67■□□□□ 0.42
GDF1P27539 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GDF1P27539 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.67■□□□□ 0.42
GDF1P27539 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GDF1P27539 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
GDF1P27539 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GDF1P27539 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.66■□□□□ 0.42
GDF1P27539 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.66■□□□□ 0.42
GDF1P27539 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.66■□□□□ 0.42
GDF1P27539 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.66■□□□□ 0.42
GDF1P27539 HLA-A-209ENST00000638375 975 ntBASIC17.66■□□□□ 0.42
GDF1P27539 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GDF1P27539 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDF1P27539 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
GDF1P27539 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.65■□□□□ 0.42
GDF1P27539 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.65■□□□□ 0.42
GDF1P27539 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GDF1P27539 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 RBM17P1-201ENST00000453646 1190 ntBASIC17.65■□□□□ 0.42
GDF1P27539 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.65■□□□□ 0.42
GDF1P27539 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 AC026271.3-201ENST00000571884 352 ntBASIC17.65■□□□□ 0.42
GDF1P27539 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.65■□□□□ 0.42
GDF1P27539 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.65■□□□□ 0.42
GDF1P27539 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.65■□□□□ 0.42
GDF1P27539 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.65■□□□□ 0.42
GDF1P27539 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GDF1P27539 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.65■□□□□ 0.42
GDF1P27539 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
GDF1P27539 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDF1P27539 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.65■□□□□ 0.42
GDF1P27539 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.64■□□□□ 0.42
GDF1P27539 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.64■□□□□ 0.41
GDF1P27539 AC004980.1-204ENST00000429707 299 ntBASIC17.64■□□□□ 0.41
GDF1P27539 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.64■□□□□ 0.41
GDF1P27539 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GDF1P27539 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.64■□□□□ 0.41
GDF1P27539 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GDF1P27539 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.64■□□□□ 0.41
GDF1P27539 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GDF1P27539 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GDF1P27539 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDF1P27539 FSCN1P1-201ENST00000568912 1481 ntBASIC17.63■□□□□ 0.41
GDF1P27539 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms