Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB4AP20338 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB4AP20338 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB4AP20338 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB4AP20338 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB4AP20338 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.89□□□□□ -0.03
RAB4AP20338 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB4AP20338 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.88□□□□□ -0.03
RAB4AP20338 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB4AP20338 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB4AP20338 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB4AP20338 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 AC092171.4-201ENST00000609130 632 ntBASIC14.88□□□□□ -0.03
RAB4AP20338 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RAB4AP20338 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RAB4AP20338 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB4AP20338 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB4AP20338 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RAB4AP20338 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB4AP20338 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB4AP20338 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB4AP20338 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB4AP20338 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB4AP20338 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB4AP20338 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB4AP20338 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
RAB4AP20338 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB4AP20338 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms