Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.8■□□□□ 0.76
NFKB1P19838 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.8■□□□□ 0.76
NFKB1P19838 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NFKB1P19838 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.8■□□□□ 0.76
NFKB1P19838 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NFKB1P19838 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.8■□□□□ 0.76
NFKB1P19838 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.8■□□□□ 0.76
NFKB1P19838 KRT8P8-201ENST00000434750 1448 ntBASIC19.8■□□□□ 0.76
NFKB1P19838 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
NFKB1P19838 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NFKB1P19838 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.8■□□□□ 0.76
NFKB1P19838 CD99P1-205ENST00000527459 561 ntBASIC19.8■□□□□ 0.76
NFKB1P19838 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.8■□□□□ 0.76
NFKB1P19838 MIR4651-201ENST00000582622 73 ntBASIC19.8■□□□□ 0.76
NFKB1P19838 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.8■□□□□ 0.76
NFKB1P19838 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NFKB1P19838 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKB1P19838 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKB1P19838 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKB1P19838 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKB1P19838 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.79■□□□□ 0.76
NFKB1P19838 MTDHP1-201ENST00000605323 784 ntBASIC19.79■□□□□ 0.76
NFKB1P19838 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKB1P19838 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NFKB1P19838 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKB1P19838 ZNF815P-204ENST00000434898 1737 ntBASIC19.79■□□□□ 0.76
NFKB1P19838 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKB1P19838 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NFKB1P19838 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 TUBB8P6-201ENST00000436895 1288 ntBASIC19.78■□□□□ 0.76
NFKB1P19838 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.78■□□□□ 0.76
NFKB1P19838 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKB1P19838 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKB1P19838 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFKB1P19838 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFKB1P19838 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NFKB1P19838 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFKB1P19838 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NFKB1P19838 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NFKB1P19838 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NFKB1P19838 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.77■□□□□ 0.76
NFKB1P19838 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.77■□□□□ 0.76
NFKB1P19838 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 NBPF21P-201ENST00000425093 1451 ntBASIC19.77■□□□□ 0.76
NFKB1P19838 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NFKB1P19838 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NFKB1P19838 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKB1P19838 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NFKB1P19838 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
NFKB1P19838 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
NFKB1P19838 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.76■□□□□ 0.75
NFKB1P19838 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.76■□□□□ 0.75
NFKB1P19838 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms