Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.43■□□□□ 0.86
RARAP10276 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RARAP10276 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.43■□□□□ 0.86
RARAP10276 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.43■□□□□ 0.86
RARAP10276 SOX15-203ENST00000570788 1093 ntBASIC20.43■□□□□ 0.86
RARAP10276 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.43■□□□□ 0.86
RARAP10276 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RARAP10276 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.42■□□□□ 0.86
RARAP10276 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RARAP10276 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RARAP10276 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.42■□□□□ 0.86
RARAP10276 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.42■□□□□ 0.86
RARAP10276 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RARAP10276 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RARAP10276 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
RARAP10276 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.42■□□□□ 0.86
RARAP10276 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.42■□□□□ 0.86
RARAP10276 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RARAP10276 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RARAP10276 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RARAP10276 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.41■□□□□ 0.86
RARAP10276 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.41■□□□□ 0.86
RARAP10276 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.41■□□□□ 0.86
RARAP10276 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RARAP10276 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RARAP10276 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.41■□□□□ 0.86
RARAP10276 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
RARAP10276 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RARAP10276 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RARAP10276 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.4■□□□□ 0.86
RARAP10276 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.4■□□□□ 0.86
RARAP10276 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.4■□□□□ 0.86
RARAP10276 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.4■□□□□ 0.86
RARAP10276 AC008687.6-201ENST00000596318 630 ntBASIC20.4■□□□□ 0.86
RARAP10276 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RARAP10276 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RARAP10276 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RARAP10276 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RARAP10276 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.39■□□□□ 0.86
RARAP10276 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RARAP10276 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RARAP10276 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RARAP10276 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms