Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 MIR1224-201ENST00000408193 85 ntBASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNYL3P0C7X3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNYL3P0C7X3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 MMP23A-201ENST00000234610 1017 ntBASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 AL353708.3-201ENST00000610272 989 ntBASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNYL3P0C7X3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 AC112907.3-201ENST00000577781 2400 ntBASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 AC099778.1-201ENST00000568593 1911 ntBASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNYL3P0C7X3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNYL3P0C7X3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 NUDT16P1-203ENST00000513809 620 ntBASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms