Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 MCRIP2P1-201ENST00000394346 511 ntBASIC16.16■□□□□ 0.18
CTSDP07339 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.16■□□□□ 0.18
CTSDP07339 MFSD11-216ENST00000590393 1141 ntBASIC16.16■□□□□ 0.18
CTSDP07339 AC100791.3-201ENST00000617619 330 ntBASIC16.16■□□□□ 0.18
CTSDP07339 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTSDP07339 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 AC093525.10-201ENST00000625130 1569 ntBASIC16.16■□□□□ 0.18
CTSDP07339 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 AL031598.1-201ENST00000561511 1773 ntBASIC16.15■□□□□ 0.18
CTSDP07339 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTSDP07339 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.15■□□□□ 0.18
CTSDP07339 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTSDP07339 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CTSDP07339 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTSDP07339 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.15■□□□□ 0.18
CTSDP07339 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.15■□□□□ 0.18
CTSDP07339 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSDP07339 AC105020.6-201ENST00000621523 1217 ntBASIC16.15■□□□□ 0.18
CTSDP07339 AC090340.1-201ENST00000620778 4980 ntBASIC16.15■□□□□ 0.18
CTSDP07339 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.15■□□□□ 0.18
CTSDP07339 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSDP07339 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CTSDP07339 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CTSDP07339 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 Z98044.1-201ENST00000632503 1764 ntBASIC16.14■□□□□ 0.17
CTSDP07339 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.14■□□□□ 0.17
CTSDP07339 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 KRT18P14-201ENST00000534205 1250 ntBASIC16.14■□□□□ 0.17
CTSDP07339 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.14■□□□□ 0.17
CTSDP07339 AC016405.3-201ENST00000607710 860 ntBASIC16.14■□□□□ 0.17
CTSDP07339 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CTSDP07339 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.14■□□□□ 0.17
CTSDP07339 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CTSDP07339 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.14■□□□□ 0.17
CTSDP07339 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSDP07339 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.14■□□□□ 0.17
CTSDP07339 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CTSDP07339 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.13■□□□□ 0.17
CTSDP07339 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.13■□□□□ 0.17
CTSDP07339 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms