Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CD74P04233 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CD74P04233 AL591742.1-201ENST00000604433 565 ntBASIC16.37■□□□□ 0.21
CD74P04233 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.37■□□□□ 0.21
CD74P04233 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.37■□□□□ 0.21
CD74P04233 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 AL512353.2-201ENST00000448759 1962 ntBASIC16.37■□□□□ 0.21
CD74P04233 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.36■□□□□ 0.21
CD74P04233 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.36■□□□□ 0.21
CD74P04233 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.36■□□□□ 0.21
CD74P04233 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CD74P04233 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.36■□□□□ 0.21
CD74P04233 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CD74P04233 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CD74P04233 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD74P04233 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CD74P04233 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.36■□□□□ 0.21
CD74P04233 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CD74P04233 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 AL162412.1-201ENST00000567129 965 ntBASIC16.35■□□□□ 0.21
CD74P04233 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 AP000997.3-201ENST00000623333 2250 ntBASIC16.35■□□□□ 0.21
CD74P04233 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.35■□□□□ 0.21
CD74P04233 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD74P04233 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD74P04233 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD74P04233 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.34■□□□□ 0.21
CD74P04233 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.34■□□□□ 0.21
CD74P04233 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.34■□□□□ 0.21
CD74P04233 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 SUDS3P1-201ENST00000505831 966 ntBASIC16.34■□□□□ 0.21
CD74P04233 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.34■□□□□ 0.21
CD74P04233 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.34■□□□□ 0.21
CD74P04233 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.34■□□□□ 0.21
CD74P04233 TERF1P2-201ENST00000583350 1212 ntBASIC16.34■□□□□ 0.21
CD74P04233 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms