Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 C1QL1P1-201ENST00000568105 661 ntBASIC19.38■□□□□ 0.69
PRAMEF1O95521 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 TMEM191A-211ENST00000637163 1067 ntBASIC19.38■□□□□ 0.69
PRAMEF1O95521 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 AIRN-201ENST00000601203 4374 ntBASIC19.37■□□□□ 0.69
PRAMEF1O95521 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF1O95521 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF1O95521 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF1O95521 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEF1O95521 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF1O95521 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF1O95521 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF1O95521 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF1O95521 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF1O95521 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PRAMEF1O95521 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms