Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SIX6O95475 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SIX6O95475 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX6O95475 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
SIX6O95475 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.28■□□□□ 0.2
SIX6O95475 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX6O95475 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIX6O95475 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 FP475955.4-201ENST00000623131 1990 ntBASIC16.27■□□□□ 0.2
SIX6O95475 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX6O95475 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SIX6O95475 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX6O95475 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX6O95475 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX6O95475 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
SIX6O95475 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX6O95475 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX6O95475 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX6O95475 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SIX6O95475 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX6O95475 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX6O95475 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX6O95475 KRT16P3-201ENST00000439127 1283 ntBASIC16.26■□□□□ 0.19
SIX6O95475 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX6O95475 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SIX6O95475 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX6O95475 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SIX6O95475 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SIX6O95475 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX6O95475 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SIX6O95475 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.25■□□□□ 0.19
SIX6O95475 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.25■□□□□ 0.19
SIX6O95475 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SIX6O95475 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms