Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 AC090164.3-201ENST00000610780 2143 ntBASIC17.35■□□□□ 0.37
CDRT1O95170 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.35■□□□□ 0.37
CDRT1O95170 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.34■□□□□ 0.37
CDRT1O95170 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDRT1O95170 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.34■□□□□ 0.37
CDRT1O95170 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDRT1O95170 AC091799.1-201ENST00000422823 811 ntBASIC17.34■□□□□ 0.37
CDRT1O95170 AC007322.3-201ENST00000426526 701 ntBASIC17.34■□□□□ 0.37
CDRT1O95170 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 AC123595.1-201ENST00000440769 1046 ntBASIC17.34■□□□□ 0.37
CDRT1O95170 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.34■□□□□ 0.37
CDRT1O95170 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.34■□□□□ 0.37
CDRT1O95170 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.34■□□□□ 0.37
CDRT1O95170 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.34■□□□□ 0.37
CDRT1O95170 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
CDRT1O95170 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.34■□□□□ 0.37
CDRT1O95170 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDRT1O95170 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDRT1O95170 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.34■□□□□ 0.37
CDRT1O95170 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDRT1O95170 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
CDRT1O95170 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.33■□□□□ 0.37
CDRT1O95170 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.33■□□□□ 0.37
CDRT1O95170 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDRT1O95170 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDRT1O95170 AC004854.2-201ENST00000608450 1441 ntBASIC17.33■□□□□ 0.36
CDRT1O95170 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.33■□□□□ 0.36
CDRT1O95170 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDRT1O95170 KRT18P20-201ENST00000548986 1279 ntBASIC17.33■□□□□ 0.36
CDRT1O95170 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.33■□□□□ 0.36
CDRT1O95170 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDRT1O95170 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.33■□□□□ 0.36
CDRT1O95170 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDRT1O95170 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDRT1O95170 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 RBM17P2-201ENST00000616397 1405 ntBASIC17.32■□□□□ 0.36
CDRT1O95170 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
CDRT1O95170 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDRT1O95170 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.32■□□□□ 0.36
CDRT1O95170 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 MIR638-201ENST00000385237 100 ntBASIC17.32■□□□□ 0.36
CDRT1O95170 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.32■□□□□ 0.36
CDRT1O95170 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.32■□□□□ 0.36
CDRT1O95170 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.32■□□□□ 0.36
CDRT1O95170 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.32■□□□□ 0.36
CDRT1O95170 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.32■□□□□ 0.36
CDRT1O95170 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.32■□□□□ 0.36
CDRT1O95170 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.32■□□□□ 0.36
CDRT1O95170 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CDRT1O95170 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDRT1O95170 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms