Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRCH4O75427 AC104417.2-201ENST00000562989 1793 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
LRCH4O75427 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 KRT17P3-201ENST00000420566 1262 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 TUBB8P6-201ENST00000436895 1288 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH4O75427 PRKY-204ENST00000533551 1019 ntBASIC20.27■□□□□ 0.84
LRCH4O75427 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH4O75427 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LRCH4O75427 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH4O75427 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH4O75427 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH4O75427 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH4O75427 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH4O75427 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH4O75427 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH4O75427 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.27■□□□□ 0.83
LRCH4O75427 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
LRCH4O75427 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH4O75427 AC098818.2-201ENST00000564925 2320 ntBASIC20.26■□□□□ 0.83
LRCH4O75427 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCH4O75427 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH4O75427 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 ESRRAP1-201ENST00000400596 1257 ntBASIC20.26■□□□□ 0.83
LRCH4O75427 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH4O75427 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.26■□□□□ 0.83
LRCH4O75427 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH4O75427 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRCH4O75427 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH4O75427 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH4O75427 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH4O75427 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRCH4O75427 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH4O75427 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRCH4O75427 AP000974.1-201ENST00000623909 2387 ntBASIC20.25■□□□□ 0.83
LRCH4O75427 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 SDHAP1-207ENST00000440850 2000 ntBASIC20.25■□□□□ 0.83
LRCH4O75427 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH4O75427 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LRCH4O75427 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRCH4O75427 NBPF21P-201ENST00000425093 1451 ntBASIC20.24■□□□□ 0.83
LRCH4O75427 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 BX323043.1-201ENST00000641006 1765 ntBASIC20.24■□□□□ 0.83
LRCH4O75427 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH4O75427 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.24■□□□□ 0.83
LRCH4O75427 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRCH4O75427 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.24■□□□□ 0.83
LRCH4O75427 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.24■□□□□ 0.83
LRCH4O75427 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.24■□□□□ 0.83
LRCH4O75427 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH4O75427 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.24■□□□□ 0.83
LRCH4O75427 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms