Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC020907.5-201ENST00000624372 1936 ntBASIC18.84■□□□□ 0.61
CNOT3O75175 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNOT3O75175 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT3O75175 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CNOT3O75175 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT3O75175 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT3O75175 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT3O75175 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT3O75175 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT3O75175 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CNOT3O75175 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT3O75175 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.83■□□□□ 0.61
CNOT3O75175 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.83■□□□□ 0.61
CNOT3O75175 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT3O75175 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT3O75175 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT3O75175 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT3O75175 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CNOT3O75175 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT3O75175 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNOT3O75175 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT3O75175 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.83■□□□□ 0.6
CNOT3O75175 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT3O75175 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT3O75175 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.83■□□□□ 0.6
CNOT3O75175 AC110285.5-201ENST00000611501 352 ntBASIC18.83■□□□□ 0.6
CNOT3O75175 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.83■□□□□ 0.6
CNOT3O75175 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
CNOT3O75175 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CNOT3O75175 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNOT3O75175 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.83■□□□□ 0.6
CNOT3O75175 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT3O75175 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT3O75175 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT3O75175 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
CNOT3O75175 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 MIR718-201ENST00000390190 70 ntBASIC18.82■□□□□ 0.6
CNOT3O75175 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.82■□□□□ 0.6
CNOT3O75175 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.82■□□□□ 0.6
CNOT3O75175 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.82■□□□□ 0.6
CNOT3O75175 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.82■□□□□ 0.6
CNOT3O75175 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CNOT3O75175 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.82■□□□□ 0.6
CNOT3O75175 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT3O75175 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CNOT3O75175 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
CNOT3O75175 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 AC007225.1-201ENST00000566331 1836 ntBASIC18.81■□□□□ 0.6
CNOT3O75175 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CNOT3O75175 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNOT3O75175 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT3O75175 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT3O75175 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms