Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PFDN1O60925 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PFDN1O60925 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
PFDN1O60925 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.45■□□□□ 0.38
PFDN1O60925 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
PFDN1O60925 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PFDN1O60925 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.45■□□□□ 0.38
PFDN1O60925 OR7E47P-201ENST00000546390 1422 ntBASIC17.45■□□□□ 0.38
PFDN1O60925 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PFDN1O60925 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.45■□□□□ 0.38
PFDN1O60925 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.45■□□□□ 0.38
PFDN1O60925 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PFDN1O60925 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.44■□□□□ 0.38
PFDN1O60925 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 LINC00896-202ENST00000609602 2128 ntBASIC17.44■□□□□ 0.38
PFDN1O60925 FP325331.1-202ENST00000623531 1380 ntBASIC17.44■□□□□ 0.38
PFDN1O60925 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PFDN1O60925 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PFDN1O60925 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.44■□□□□ 0.38
PFDN1O60925 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.44■□□□□ 0.38
PFDN1O60925 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.44■□□□□ 0.38
PFDN1O60925 AC060814.1-201ENST00000554326 538 ntBASIC17.44■□□□□ 0.38
PFDN1O60925 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
PFDN1O60925 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PFDN1O60925 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.43■□□□□ 0.38
PFDN1O60925 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
PFDN1O60925 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PFDN1O60925 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.43■□□□□ 0.38
PFDN1O60925 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PFDN1O60925 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PFDN1O60925 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.43■□□□□ 0.38
PFDN1O60925 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PFDN1O60925 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PFDN1O60925 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PFDN1O60925 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 AC135776.1-201ENST00000319817 2481 ntBASIC17.42■□□□□ 0.38
PFDN1O60925 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms