Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 NBPF21P-201ENST00000425093 1451 ntBASIC18.29■□□□□ 0.52
PRAMEF2O60811 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
PRAMEF2O60811 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.29■□□□□ 0.52
PRAMEF2O60811 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF2O60811 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 KRT16P5-201ENST00000455284 522 ntBASIC18.28■□□□□ 0.52
PRAMEF2O60811 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 BX088651.1-201ENST00000540551 451 ntBASIC18.28■□□□□ 0.52
PRAMEF2O60811 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF2O60811 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 AFG3L1P-217ENST00000557444 2447 ntBASIC18.28■□□□□ 0.52
PRAMEF2O60811 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF2O60811 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.27■□□□□ 0.52
PRAMEF2O60811 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF2O60811 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.27■□□□□ 0.51
PRAMEF2O60811 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 AC211429.1-201ENST00000415277 523 ntBASIC18.26■□□□□ 0.51
PRAMEF2O60811 AL353807.1-201ENST00000427475 662 ntBASIC18.26■□□□□ 0.51
PRAMEF2O60811 ECEL1P3-201ENST00000427961 737 ntBASIC18.26■□□□□ 0.51
PRAMEF2O60811 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF2O60811 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEF2O60811 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms