Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HCN1O60741 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 HCG11-201ENST00000411553 5696 ntBASIC18.17■□□□□ 0.5
HCN1O60741 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 MIR718-201ENST00000390190 70 ntBASIC18.17■□□□□ 0.5
HCN1O60741 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.17■□□□□ 0.5
HCN1O60741 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 AC008550.1-201ENST00000511500 884 ntBASIC18.17■□□□□ 0.5
HCN1O60741 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.17■□□□□ 0.5
HCN1O60741 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.17■□□□□ 0.5
HCN1O60741 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.17■□□□□ 0.5
HCN1O60741 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.17■□□□□ 0.5
HCN1O60741 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCN1O60741 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.17■□□□□ 0.5
HCN1O60741 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.16■□□□□ 0.5
HCN1O60741 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.16■□□□□ 0.5
HCN1O60741 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HCN1O60741 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.16■□□□□ 0.5
HCN1O60741 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HCN1O60741 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HCN1O60741 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCN1O60741 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
HCN1O60741 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.16■□□□□ 0.5
HCN1O60741 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.15■□□□□ 0.5
HCN1O60741 AC125437.2-201ENST00000625180 2167 ntBASIC18.15■□□□□ 0.5
HCN1O60741 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HCN1O60741 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms