Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSSCA1O60232 AL390961.4-201ENST00000623958 2535 ntBASIC15.88■□□□□ 0.13
SSSCA1O60232 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.87■□□□□ 0.13
SSSCA1O60232 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.87■□□□□ 0.13
SSSCA1O60232 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 AC079598.2-202ENST00000546624 1451 ntBASIC15.87■□□□□ 0.13
SSSCA1O60232 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.87■□□□□ 0.13
SSSCA1O60232 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.87■□□□□ 0.13
SSSCA1O60232 AL031963.3-201ENST00000606441 850 ntBASIC15.87■□□□□ 0.13
SSSCA1O60232 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SSSCA1O60232 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SSSCA1O60232 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.87■□□□□ 0.13
SSSCA1O60232 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
SSSCA1O60232 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSSCA1O60232 AC006333.2-201ENST00000607957 2099 ntBASIC15.87■□□□□ 0.13
SSSCA1O60232 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 KRT8P20-201ENST00000423953 1409 ntBASIC15.86■□□□□ 0.13
SSSCA1O60232 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 AL136967.2-201ENST00000623968 743 ntBASIC15.86■□□□□ 0.13
SSSCA1O60232 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SSSCA1O60232 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.86■□□□□ 0.13
SSSCA1O60232 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSSCA1O60232 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.86■□□□□ 0.13
SSSCA1O60232 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.85■□□□□ 0.13
SSSCA1O60232 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms