Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.46■□□□□ 0.39
CXCL13O43927 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CXCL13O43927 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.46■□□□□ 0.38
CXCL13O43927 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CXCL13O43927 TSPY7P-201ENST00000431358 1114 ntBASIC17.45■□□□□ 0.38
CXCL13O43927 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.45■□□□□ 0.38
CXCL13O43927 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.45■□□□□ 0.38
CXCL13O43927 CD177P1-201ENST00000606252 935 ntBASIC17.45■□□□□ 0.38
CXCL13O43927 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 CR392000.1-201ENST00000624770 1228 ntBASIC17.45■□□□□ 0.38
CXCL13O43927 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL13O43927 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL13O43927 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL13O43927 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CXCL13O43927 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CXCL13O43927 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL13O43927 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CXCL13O43927 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL13O43927 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 KSR1P1-201ENST00000446298 240 ntBASIC17.44■□□□□ 0.38
CXCL13O43927 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL13O43927 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL13O43927 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.44■□□□□ 0.38
CXCL13O43927 MIR4497-201ENST00000583208 89 ntBASIC17.44■□□□□ 0.38
CXCL13O43927 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.44■□□□□ 0.38
CXCL13O43927 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
CXCL13O43927 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.44■□□□□ 0.38
CXCL13O43927 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CXCL13O43927 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL13O43927 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL13O43927 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL13O43927 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 HLA-A-209ENST00000638375 975 ntBASIC17.43■□□□□ 0.38
CXCL13O43927 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL13O43927 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL13O43927 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL13O43927 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL13O43927 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms