Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.48■□□□□ 0.71
LDB2O43679 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.48■□□□□ 0.71
LDB2O43679 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LDB2O43679 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LDB2O43679 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.48■□□□□ 0.71
LDB2O43679 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LDB2O43679 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
LDB2O43679 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LDB2O43679 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB2O43679 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.47■□□□□ 0.71
LDB2O43679 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LDB2O43679 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.47■□□□□ 0.71
LDB2O43679 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.47■□□□□ 0.71
LDB2O43679 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB2O43679 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LDB2O43679 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB2O43679 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB2O43679 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LDB2O43679 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LDB2O43679 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LDB2O43679 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LDB2O43679 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.46■□□□□ 0.71
LDB2O43679 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 KRASP1-201ENST00000407852 552 ntBASIC19.46■□□□□ 0.71
LDB2O43679 AC239809.2-201ENST00000415381 517 ntBASIC19.46■□□□□ 0.71
LDB2O43679 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 AC124016.1-201ENST00000609552 612 ntBASIC19.46■□□□□ 0.71
LDB2O43679 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LDB2O43679 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
LDB2O43679 AC104417.2-201ENST00000562989 1793 ntBASIC19.46■□□□□ 0.71
LDB2O43679 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB2O43679 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LDB2O43679 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LDB2O43679 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.45■□□□□ 0.7
LDB2O43679 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
LDB2O43679 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
LDB2O43679 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.45■□□□□ 0.7
LDB2O43679 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.45■□□□□ 0.7
LDB2O43679 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.45■□□□□ 0.7
LDB2O43679 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.45■□□□□ 0.7
LDB2O43679 AC133681.1-201ENST00000465482 601 ntBASIC19.45■□□□□ 0.7
LDB2O43679 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.45■□□□□ 0.7
LDB2O43679 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LDB2O43679 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LDB2O43679 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
LDB2O43679 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB2O43679 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LDB2O43679 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.44■□□□□ 0.7
LDB2O43679 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.44■□□□□ 0.7
LDB2O43679 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
LDB2O43679 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.44■□□□□ 0.7
LDB2O43679 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.44■□□□□ 0.7
LDB2O43679 AC004264.1-201ENST00000608354 794 ntBASIC19.44■□□□□ 0.7
LDB2O43679 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms