Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CHMP2AO43633 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CHMP2AO43633 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP2AO43633 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2AO43633 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.93■■□□□ 1.1
CHMP2AO43633 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP2AO43633 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.93■■□□□ 1.1
CHMP2AO43633 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP2AO43633 AL353708.3-201ENST00000610272 989 ntBASIC21.93■■□□□ 1.1
CHMP2AO43633 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.93■■□□□ 1.1
CHMP2AO43633 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CHMP2AO43633 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.92■■□□□ 1.1
CHMP2AO43633 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.92■■□□□ 1.1
CHMP2AO43633 AC026471.5-201ENST00000615068 467 ntBASIC21.92■■□□□ 1.1
CHMP2AO43633 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHMP2AO43633 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP2AO43633 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP2AO43633 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.92■■□□□ 1.1
CHMP2AO43633 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP2AO43633 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2AO43633 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP2AO43633 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.91■■□□□ 1.1
CHMP2AO43633 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 KRT16P1-201ENST00000399124 1418 ntBASIC21.91■■□□□ 1.1
CHMP2AO43633 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHMP2AO43633 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CHMP2AO43633 LINC01465-201ENST00000408887 1940 ntBASIC21.91■■□□□ 1.1
CHMP2AO43633 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CHMP2AO43633 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 KSR1P1-201ENST00000446298 240 ntBASIC21.91■■□□□ 1.1
CHMP2AO43633 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.91■■□□□ 1.1
CHMP2AO43633 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.91■■□□□ 1.1
CHMP2AO43633 MIR4785-201ENST00000585005 73 ntBASIC21.91■■□□□ 1.1
CHMP2AO43633 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CHMP2AO43633 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CHMP2AO43633 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.91■■□□□ 1.1
CHMP2AO43633 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2AO43633 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMP2AO43633 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2AO43633 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMP2AO43633 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP2AO43633 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2AO43633 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2AO43633 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP2AO43633 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2AO43633 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMP2AO43633 HLA-A-209ENST00000638375 975 ntBASIC21.9■■□□□ 1.1
CHMP2AO43633 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.9■■□□□ 1.1
CHMP2AO43633 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2AO43633 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.89■■□□□ 1.1
CHMP2AO43633 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP2AO43633 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CHMP2AO43633 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 AL355355.2-201ENST00000442321 338 ntBASIC21.89■■□□□ 1.09
CHMP2AO43633 TSPY15P-201ENST00000457163 923 ntBASIC21.89■■□□□ 1.09
CHMP2AO43633 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.89■■□□□ 1.09
CHMP2AO43633 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP2AO43633 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CHMP2AO43633 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2AO43633 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.89■■□□□ 1.09
CHMP2AO43633 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.89■■□□□ 1.09
CHMP2AO43633 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP2AO43633 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 AC125437.2-201ENST00000625180 2167 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms