Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXN1O15353 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXN1O15353 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FOXN1O15353 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
FOXN1O15353 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 AC007225.1-201ENST00000566331 1836 ntBASIC23.27■■□□□ 1.32
FOXN1O15353 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.27■■□□□ 1.32
FOXN1O15353 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.27■■□□□ 1.32
FOXN1O15353 HOMER2P1-201ENST00000455653 964 ntBASIC23.27■■□□□ 1.32
FOXN1O15353 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
FOXN1O15353 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
FOXN1O15353 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.27■■□□□ 1.32
FOXN1O15353 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.27■■□□□ 1.32
FOXN1O15353 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.27■■□□□ 1.32
FOXN1O15353 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXN1O15353 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
FOXN1O15353 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.26■■□□□ 1.31
FOXN1O15353 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 ATP5G2P1-201ENST00000433580 426 ntBASIC23.26■■□□□ 1.31
FOXN1O15353 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 AC097488.1-201ENST00000507834 756 ntBASIC23.26■■□□□ 1.31
FOXN1O15353 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.26■■□□□ 1.31
FOXN1O15353 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 DGCR10-201ENST00000609839 495 ntBASIC23.26■■□□□ 1.31
FOXN1O15353 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
FOXN1O15353 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXN1O15353 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXN1O15353 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
FOXN1O15353 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.25■■□□□ 1.31
FOXN1O15353 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.25■■□□□ 1.31
FOXN1O15353 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXN1O15353 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXN1O15353 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
FOXN1O15353 GABARAPL3-202ENST00000624044 1851 ntBASIC23.24■■□□□ 1.31
FOXN1O15353 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.24■■□□□ 1.31
FOXN1O15353 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.24■■□□□ 1.31
FOXN1O15353 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 AC009078.2-202ENST00000463353 338 ntBASIC23.24■■□□□ 1.31
FOXN1O15353 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
FOXN1O15353 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.24■■□□□ 1.31
FOXN1O15353 AC111152.3-201ENST00000569699 673 ntBASIC23.24■■□□□ 1.31
FOXN1O15353 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXN1O15353 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.24■■□□□ 1.31
FOXN1O15353 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXN1O15353 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXN1O15353 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXN1O15353 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FOXN1O15353 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms