Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NDUFA1O15239 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NDUFA1O15239 OR6D1P-202ENST00000641007 5290 ntBASIC13.31□□□□□ -0.28
NDUFA1O15239 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NDUFA1O15239 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFA1O15239 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFA1O15239 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFA1O15239 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFA1O15239 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
NDUFA1O15239 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFA1O15239 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA1O15239 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NDUFA1O15239 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 PKD1P1-201ENST00000458669 6805 ntBASIC13.3□□□□□ -0.28
NDUFA1O15239 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 AC135050.7-201ENST00000624508 2218 ntBASIC13.3□□□□□ -0.28
NDUFA1O15239 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA1O15239 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFA1O15239 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFA1O15239 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 UBE2DNL-204ENST00000602536 740 ntBASIC13.3□□□□□ -0.28
NDUFA1O15239 MYCNOS-205ENST00000641950 531 ntBASIC13.3□□□□□ -0.28
NDUFA1O15239 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.3□□□□□ -0.28
NDUFA1O15239 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA1O15239 AC005332.8-201ENST00000622750 2735 ntBASIC13.3□□□□□ -0.28
NDUFA1O15239 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFA1O15239 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFA1O15239 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA1O15239 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA1O15239 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA1O15239 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA1O15239 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA1O15239 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA1O15239 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA1O15239 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA1O15239 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA1O15239 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA1O15239 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms